CDS

Accession Number TCMCG057C39764
gbkey CDS
Protein Id XP_018443889.1
Location complement(join(6995239..6995264,6995364..6995502,6995645..6995728,6995827..6995979,6996086..6996238,6996574..6996675))
Gene LOC108815864
GeneID 108815864
Organism Raphanus sativus

Protein

Length 218aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018588387.1
Definition PREDICTED: vacuolar protein sorting-associated protein 20 homolog 2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category U
Description Belongs to the SNF7 family
KEGG_TC -
KEGG_Module M00412        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
ko04147        [VIEW IN KEGG]
KEGG_ko ko:K12195        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
ko04217        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
map04217        [VIEW IN KEGG]
GOs GO:0000815        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005768        [VIEW IN EMBL-EBI]
GO:0005770        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006900        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007032        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010008        [VIEW IN EMBL-EBI]
GO:0010256        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016050        [VIEW IN EMBL-EBI]
GO:0016192        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031410        [VIEW IN EMBL-EBI]
GO:0031982        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036452        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044433        [VIEW IN EMBL-EBI]
GO:0044440        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0061024        [VIEW IN EMBL-EBI]
GO:0070676        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097708        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098796        [VIEW IN EMBL-EBI]
GO:0098805        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGGAATATGTTCGTGAAGAGACCGAAGATCACAGAGGTTGATCGAGCGATTCTCTCTCTCAAAACCCAACGCCGCAAGCTTGGTCAATATCAGCAACAGCTTGAGAAAGTAATTGAGGCCGAAAAGCAAGCTGCAAGAGACCTAATCCGTGAGAAGCGGAAAGACAGGGCCTTGTTAGCATTGAAGAAGAAGCGGACTCAAGAAGACTTATTGAAGCAAGTTGATCAGTGGGTCATCAATGTCGAACAACAATTGGCAGATATTGAACTAACAAGCAAGCAGAAGGCAGTCTTTGAGAGCTTGAAGCAAGGTAACAGTGCCATTAAGGCGATTCAGAGTGAAGTCAACCTTGACGATGTTCAGAAACTAATGGATGATACTGCCGAGGCCAAGGCTTATCAGGATGAGCTGAGTGCCATACTGGGGGAGAAACTATCAGAAGAAGACGAAGAAGAGATCTTAGCAGAATTCGATGACCTCGAAAATCAGCTCAATGTTGAAGACATGCCTGACGTCCCTACAACAGAGCCAGTGCGTGAAGAAGACGAGATATTGGATCTCCCTGATGTGCCGACAAAACAACCACTCGCTGCTCCCACTGCAGAAATCGCTTCAACAAAGAGAAAAGTACTTGAAGAACCTTTGGAAGCTTGA
Protein:  
MGNMFVKRPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALLALKKKRTQEDLLKQVDQWVINVEQQLADIELTSKQKAVFESLKQGNSAIKAIQSEVNLDDVQKLMDDTAEAKAYQDELSAILGEKLSEEDEEEILAEFDDLENQLNVEDMPDVPTTEPVREEDEILDLPDVPTKQPLAAPTAEIASTKRKVLEEPLEA